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The Smith-Waterman algorithm has become a linchpin in the rapidly expanding world of bioinformatics, the go-to computational model for DNA sequencing and local sequence alignments. With the growth in recent years in genome research, there has been a sharp increase in the amount of data around genes and proteins that needs to be collected and analyzed, and the 36-year-old Smith-Waterman algorithm is a primary way of sequencing the data.
The key to the algorithm is that rather than examining an entire DNA or protein sequence, Smith-Waterman uses a technique called dynamic programming in which the algorithm looks at segments of …
Tuning Up Knights Landing For Gene Sequencing was written by Jeffrey Burt at The Next Platform.
Verizon is selling software it's developed for its own networks to other carriers.
Unlike Verizon, AT&T says its 5G will be standards compliant.
Ciena is responding to the way running a network is changing.
We’re excited to share news of the second Applied Networking Research Workshop (ANRW2017), which will take place in Prague, Czech Republic, on July 15. This one-day workshop will be co-sponsored by the Association for Computing Machinery (ACM), the Internet Society and the Internet Research Task Force (IRTF). The Call for Papers is open now, with a deadline of 3 April.
Fast Convergence and the Fast Reroute Network reliability is an important design aspect for deployability of time and loss sensitive applications. When a link, node or SRLG failure occurs in a routed network, there is inevitably a period of disruption to the delivery of traffic until the network reconverges on the new topology. Fast reaction is essential […]
The post Fast Convergence and the Fast Reroute – Definitions/Design Considerations in IP and MPLS appeared first on Cisco Network Design and Architecture | CCDE Bootcamp | orhanergun.net.

I programmed a thing. It’s called Probot. Probot is a quick and easy way to get high quality answers to your accounting and tax questions. Probot will find a real live expert to answer your question and handle all the details. You can get your questions answered over Facebook Messenger, Slack, or the web. Answers start at $10. That’s the pitch.
Seems like a natural in this new age of bots, doesn’t it? I thought so anyway. Not so much (so far), but more on that later.
I think Probot is interesting enough to cover because it’s a good example of how one programmer--me---can accomplish quite a lot using today’s infrastructure.
All this newfangled cloud/serverless/services stuff does in fact work. I was able to program a system spanning Messenger, Slack, and the web, in a way that is relatively scalabile, available, and affordable, while requiring minimal devops.
Gone are the days of worrying about VPS limits, driving down to a colo site to check on a sick server, or even worrying about auto-scaling clusters of containers/VMs. At least for many use cases.
Many years of programming experience and writing this blog is no protection against making mistakes. I made a Continue reading