Fighting Cancer: The Unexpected Benefit Of Open Sourcing Our Code
Recently I was contacted by Dr. Igor Kozin from The Institute of Cancer Research in London. He asked about the optimal way to compile CloudFlare's open source fork of zlib. It turns out that zlib is widely used to compress the SAM/BAM files that are used for DNA sequencing. And it turns out our zlib fork is the best open source solution for that file format.
CC BY-SA 2.0 image by Shaury Nash
The files used for this kind of research reach hundreds of gigabytes and every time they are compressed and decompressed with our library many important seconds are saved, bringing the cure for cancer that much closer. At least that's what I am going to tell myself when I go to bed.
This made me realize that the benefits of open source go much farther than one can imagine, and you never know where a piece of code may end up. Open sourcing makes sophisticated algorithms and software accessible to individuals and organizations that would not have the resources to develop them on their own, or the money pay for a proprietary solution.
It also made me wonder exactly what we did to zlib that makes it Continue reading